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Amazon EC2 Security groups
Analyzing Barcode Data in SPIDER
Archived and Compressed Files
BLAST
Calling SNPs in Next-gen Data
Cloud computing at Amazon
Computing Resources on Campus
DESeq
Differential Gene Expression Python Pipeline
DNAseq Assembly in Velvet
edgeR
Editing text files
File Formatting
Getting Started With Your Data
Installing Programs
IO Redirection
Killing Processes
Mapping With BWA and Bowtie
Orthology Assignment
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Bench Work
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Protocols
Sequencing Centers
Basic Unix tools and commands
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Archived and Compressed Files
Killing Processes
Unix Commands
Editing text files
Installing Programs
Job control and useful trickery for writing your own pipelines
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IO Redirection
Running Long Jobs
The basics of working remotely
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Computing Resources on Campus
Working on Remote Machines
Analysis Tools
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BLAST
File Formatting
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Cloud Computing with Amazon
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Amazon EC2 Security groups
Cloud computing at Amazon
The Most Bang for Your Buck
Tutorials
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Analyzing Barcode Data in SPIDER
Calling SNPs in Next-gen Data
DNAseq Assembly in Velvet
Getting Started With Your Data
Orthology Assignment
RNAseq Assembly in Trinity
Setting up an FTP server on a Mac
DESeq
Differential Gene Expression Python Pipeline
edgeR
Mapping With BWA and Bowtie
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